Insertion junction: LMJ.RY0402.061021_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.061021
Chromosome:chromosome_17
Location:2404375
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre17.g715300 PKD2 sense CDS

Insertion site details

Flanking sequence (orientation from cassette outwards):TTCCTGTAGGCTCGGGTGTGAGGGTTTGGG
Internal bar code:TGGGGCCCTCGCCCAGGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:99.8396
LEAP-Seq n confirming:1245
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAGTGCTGTATGAGCAG
Suggested primer 2:CTGCAGGGACAAAAAGAAGC