Insertion junction: LMJ.RY0402.061021_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.061021
Chromosome:chromosome 17
Location:2404375
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g715300 PKD2 (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Polycystin-2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGTAGGCTCGGGTGTGAGGGTTTGGG
Internal bar code:TGGGGCCCTCGCCCAGGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:99.8396
LEAP-Seq n confirming:1245
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAGTGCTGTATGAGCAG
Suggested primer 2:CTGCAGGGACAAAAAGAAGC