Insertion junction: LMJ.RY0402.061094_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.061094
Chromosome:chromosome 15
Location:772895
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre15.g640101 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGAACTCCACTTTACTCTTCAGACTTC
Internal bar code:TGATGCAAAAGGTGTAAGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:276
LEAP-Seq percent confirming:41.1479
LEAP-Seq n confirming:846
LEAP-Seq n nonconfirming:1210
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCCAACTGGTGAGTA
Suggested primer 2:TACTCATGCCCACAAGCAAG