Insertion junction: LMJ.RY0402.061462_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.061462
Chromosome:chromosome 3
Location:6646825
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTGAGGTGAGCCGATGAGCGGAAGGT
Internal bar code:ATCTGGGATTCGGGGAGGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:29.1667
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:119
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACAACGGAGCTGCTCAT
Suggested primer 2:CCCGCATCACTACCGTACTT