Insertion junction: LMJ.RY0402.061462_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.061462
Chromosome:chromosome 3
Location:6646860
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAACCACGGGTCGAAGGGTGCTGCGCCAT
Internal bar code:TCGCACCGTTAAATCCTTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:534
LEAP-Seq percent confirming:99.7356
LEAP-Seq n confirming:1509
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACAACGGAGCTGCTCAT
Suggested primer 2:CCCGCATCACTACCGTACTT