Insertion junction: LMJ.RY0402.061464_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.061464
Chromosome:chromosome 14
Location:3338297
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g629960 (1 of 2) 2.3.2.15 - Glutathione gamma-glutamylcysteinyltransferase / Phytochelatin synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGACGGGCGGCCCCACACGTGCGACTGA
Internal bar code:TCGAAGGACGAGTTATTGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:958
LEAP-Seq percent confirming:96.2871
LEAP-Seq n confirming:3501
LEAP-Seq n nonconfirming:135
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCACTTCTCTGTACCAA
Suggested primer 2:ACTCCAACAACGACACTCCC