Insertion junction: LMJ.RY0402.061613_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.061613
Chromosome:chromosome 9
Location:2111939
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTCTGAACCTCCCACGCGGAGGCACGG
Internal bar code:GTGTTCATTTATTGTACGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:99.58
LEAP-Seq n confirming:19206
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GATAAGAGCGTCAAGCGTCC
Suggested primer 2:CAGTGAGTGAGCGAGTCAGC