Insertion junction: LMJ.RY0402.061754_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.061754
Chromosome:chromosome 3
Location:5374263
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATACTCGCTTCGTGTAGCCCCGACAG
Internal bar code:AAACGTCTATACCCGAGGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:99.7538
LEAP-Seq n confirming:5673
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGTCTGAAGCGTGTGA
Suggested primer 2:CATAAGGACGTGGCGTAGGT