Insertion junction: LMJ.RY0402.061923_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.061923
Chromosome:chromosome 1
Location:3433932
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g021900 PUS11 (1 of 1) PTHR11142:SF10 - TRNA PSEUDOURIDINE SYNTHASE; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGGCAACGGTGGACGTGCGCCACTGG
Internal bar code:TACGTGTCACTGTGTGGAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:512
LEAP-Seq percent confirming:99.8154
LEAP-Seq n confirming:2163
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGACACCACTGTTGACGG
Suggested primer 2:GACAACGAATGAGAGCGTCA