Insertion junction: LMJ.RY0402.061936_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.061936
Chromosome:chromosome 14
Location:1781567
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g619854 ELG35 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCTCTGCCTCAAAATGAAACCACCCC
Internal bar code:TGTGTTGCATTAATTCATGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:50
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACAAAGCGTGCGTAATC
Suggested primer 2:GGGTTATCTGACCGAGTCCA