Insertion junction: LMJ.RY0402.062084_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.062084
Chromosome:chromosome 17
Location:4039848
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCTTGGCCCCGTGCGGTGCGGCGCGGA
Internal bar code:ATATTTCCAGATTAGCTTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:99.6938
LEAP-Seq n confirming:9117
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTTTGGCCATGTTTCTT
Suggested primer 2:GCGGTCGATACGTGTGTATG