Insertion junction: LMJ.RY0402.062091_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.062091
Chromosome:chromosome 9
Location:3371615
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTTCCTTGGGTCGGCGCAAAAAATACT
Internal bar code:TATAGTTGGCCCGGGGGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:90.1183
LEAP-Seq n confirming:1295
LEAP-Seq n nonconfirming:142
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGGCCAACTTGAAGGAG
Suggested primer 2:CTCTGAGCCTTACACCAGCC