Insertion junction: LMJ.RY0402.062259_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.062259
Chromosome:chromosome 9
Location:6734996
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g409000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGGGGTGAGGTGGAGGCGCAGGAGCCG
Internal bar code:CCTGTTCTGAATGCCAAGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1374
LEAP-Seq percent confirming:99.0678
LEAP-Seq n confirming:2338
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTGCTGATGCACTTCCA
Suggested primer 2:ACCTTGTGATGGAGGACCAG