Insertion junction: LMJ.RY0402.062259_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.062259
Chromosome:chromosome 9
Location:6735363
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g409000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAAGGATGCGGCCCCATTGTGCCCACC
Internal bar code:GCGGCGTTCAGGGGCAGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:67.0968
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACACCTAACCCTTGTGC
Suggested primer 2:TTGTCTACCTTTGGGAACGG