Insertion junction: LMJ.RY0402.062549_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.062549
Chromosome:chromosome 9
Location:4204861
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394251 PF16 Central pair associated protein; (1 of 1) PF00514//PF13513 - Armadillo/beta-catenin-like repeat (Arm) // HEAT-like repeat (HEAT_EZ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAAAGCGCAACAATAGCATATTGTGCT
Internal bar code:GGATCCATATAAGCCGTTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:99.9006
LEAP-Seq n confirming:2010
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCTTAGCGTCCTGGTT
Suggested primer 2:ACAACTCGAAGTGGTTTGGG