Insertion junction: LMJ.RY0402.062564_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.062564
Chromosome:chromosome 8
Location:4549779
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCAGTGCGGGTGCAGAACACTGCATTG
Internal bar code:AGCAAGCGGGCCGGGACGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:848
LEAP-Seq percent confirming:86.0752
LEAP-Seq n confirming:2930
LEAP-Seq n nonconfirming:474
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTTCTTTGACCTGCTGC
Suggested primer 2:GCCTGCTCAAAGGTTCAGTC