Insertion junction: LMJ.RY0402.062779_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.062779
Chromosome:chromosome 12
Location:6226709
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g536800 CGL52 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTGTGAGTTGTGGCAGTTGCGAAGCCG
Internal bar code:TTCCACCCCCGGCCCGAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:57.4887
LEAP-Seq n confirming:2541
LEAP-Seq n nonconfirming:1879
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGAGACACTGGGCTAAG
Suggested primer 2:CAGGCGCCTATCTAGCAATC