Insertion junction: LMJ.RY0402.062815_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.062815
Chromosome:chromosome 3
Location:7631903
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g204350 CLPR4 (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGGGAAGGGCGAGTTGCAGGTTTGTGA
Internal bar code:AGTCTCTTCGTCTCCCACCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:99.8416
LEAP-Seq n confirming:5671
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTTTGTGTGTGTGGAGG
Suggested primer 2:ACGGTAGAGGTGGTCAGGTG