Insertion junction: LMJ.RY0402.062841_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.062841
Chromosome:chromosome 3
Location:1135478
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g149150 (1 of 1) IPR000104//IPR013022 - Antifreeze protein, type I // Xylose isomerase-like, TIM barrel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACTGCTGCCGTCGTCCCGCGCAGAGGC
Internal bar code:GGCAGGTCGATTCTTGGAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:260
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGCTGCACAATGATAA
Suggested primer 2:AAAGGGTATGCACATTTCGC