Insertion junction: LMJ.RY0402.062845_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.062845
Chromosome:chromosome 5
Location:1026937
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g246553 3'UTR|3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTAACCTCTGCTCACCTTCCCATCCGCT
Internal bar code:GCCGGGCGGCTCCATCACTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:24.1625
LEAP-Seq n confirming:1659
LEAP-Seq n nonconfirming:5207
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGACACACACCCTCACGA
Suggested primer 2:AAACCAACGAAAACGAGTGG