Insertion junction: LMJ.RY0402.063259_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.063259
Chromosome:chromosome 2
Location:5079033
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g104800 HTV1 (1 of 35) IPR000164//IPR007125//IPR009072 - Histone H3/CENP-A // Histone H2A/H2B/H3 // Histone-fold; Histone H3 variant 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGCTCAGAGGCAGCTTATGGAAACCGG
Internal bar code:GCGCTGGGTAGAAGATGACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:80.898
LEAP-Seq n confirming:991
LEAP-Seq n nonconfirming:234
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCCGTCTTCAGACAAA
Suggested primer 2:CTTTCAATAGGGGTGCGTGT