Insertion junction: LMJ.RY0402.063310_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.063310
Chromosome:chromosome 9
Location:3897201
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g392208 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCGTCTGCGCCCGCGCACTCACGGGG
Internal bar code:CTACGATCGCAGCGGATGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:934
LEAP-Seq percent confirming:99.5084
LEAP-Seq n confirming:2429
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGCCAGACTTGAATGC
Suggested primer 2:CATGTGAGTTGTCACCGGAC