Insertion junction: LMJ.RY0402.063353_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.063353
Chromosome:chromosome 1
Location:3989091
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g025950 PPR8 (1 of 1) IPR000209//IPR002885 - Peptidase S8/S53 domain // Pentatricopeptide repeat; PentatricoPeptide Repeat protein 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTTGACTCACGCACGAGCTGAGCTGCT
Internal bar code:TGACATGCAGAGCGGTGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:195
LEAP-Seq percent confirming:83.0367
LEAP-Seq n confirming:1586
LEAP-Seq n nonconfirming:324
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTACTGCCGCTGTTAC
Suggested primer 2:TACACACCACACAACATGCG