Insertion junction: LMJ.RY0402.063401_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.063401
Chromosome:chromosome 12
Location:3046291
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGGAGGGAGCTTGCCGGAGTGAAGTTG
Internal bar code:GAAAGAGAGGCAACGCCGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:88.1377
LEAP-Seq n confirming:4941
LEAP-Seq n nonconfirming:665
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCAAATCCAATGCTGC
Suggested primer 2:ACACACTTCCGAAAACCCTG