Insertion junction: LMJ.RY0402.063479_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.063479
Chromosome:chromosome 2
Location:5169017
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCGGGCCTGTTCAGCCGGCCCCAGCGG
Internal bar code:AGGACGGGTGCTCGGGGGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:99.4542
LEAP-Seq n confirming:10750
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCAACCCAAAGGGATCT
Suggested primer 2:ACCCGGACAAGTTTGTGAAG