Insertion junction: LMJ.RY0402.063479_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.063479
Chromosome:chromosome 2
Location:5169019
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCGCCTGCCGCTTGTCCAGGCTGTGG
Internal bar code:TCTACAGAGGTTCAAAGAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:91.1868
LEAP-Seq n confirming:258729
LEAP-Seq n nonconfirming:25006
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCAACCCAAAGGGATCT
Suggested primer 2:ACCCGGACAAGTTTGTGAAG