Insertion junction: LMJ.RY0402.063541_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.063541
Chromosome:chromosome 11
Location:1210577
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467694 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCAAGCCTTCGCAGCCTTGAACACGCT
Internal bar code:CTGACGACGGATTTTGCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:585
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTCGCAAAGAGTCCACA
Suggested primer 2:GTGATGAGGATGTTTGGCCT