Insertion junction: LMJ.RY0402.063580_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.063580
Chromosome:chromosome 3
Location:6648570
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATAAAACCAGCCATCCTATAGCGGACGC
Internal bar code:ACCCTGTTGAGCCATGTAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1047
LEAP-Seq percent confirming:99.5747
LEAP-Seq n confirming:3980
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGCAGCTCCGTTGTCTT
Suggested primer 2:TCATAGCCCAGCTGTGTCAG