Insertion junction: LMJ.RY0402.063644_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.063644
Chromosome:chromosome 17
Location:557211
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g699700 Hypothetical protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACCCTGCATCAATGAAGCAAAAGGGCC
Internal bar code:TGTCTCGTCGTGAACGGTATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:99.375
LEAP-Seq n confirming:636
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AATGATGACGCCTAACGTCC
Suggested primer 2:AATACCGCGTTCAACTACCG