Insertion junction: LMJ.RY0402.063727_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.063727
Chromosome:chromosome 1
Location:4627375
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g031800 (1 of 1) PTHR23083//PTHR23083:SF433 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAATATGTTCGTGGTATCGAAGCGCCCTT
Internal bar code:ATTCCCAATTCCGGGATAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:99.0519
LEAP-Seq n confirming:7000
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTTCATTGCTCTCGGCT
Suggested primer 2:TCAGTCAGCTCATGCGTAGG