Insertion junction: LMJ.RY0402.063740_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.063740
Chromosome:chromosome 8
Location:4373403
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCACCCCTGCCGCACTCGCAATTGTA
Internal bar code:GCAATGGACCGCCACGCTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:97.4495
LEAP-Seq n confirming:4050
LEAP-Seq n nonconfirming:106
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGGTGCACTGTGTTGG
Suggested primer 2:AACTTGACCAAACCACCAGC