Insertion junction: LMJ.RY0402.063819_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.063819
Chromosome:chromosome 16
Location:4297767
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g667900 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; ANT-subfamily ortholog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCGCTGCCGCTCCCCCCGATGCCCAC
Internal bar code:AGGGGGTTGAGCCTGTGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:748
LEAP-Seq percent confirming:62.6137
LEAP-Seq n confirming:3718
LEAP-Seq n nonconfirming:2220
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAATTACCTCGCTCGTG
Suggested primer 2:GGCCTCGGTCATGTCTATGT