Insertion junction: LMJ.RY0402.063986_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.063986
Chromosome:chromosome 12
Location:3942728
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g516300 CGL154 Conserved in the Green Lineage; (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAAGTTGGGACTACAGCCAGGGCATCG
Internal bar code:AGTGTGCTGCGGCAGCTACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:24.5775
LEAP-Seq n confirming:989
LEAP-Seq n nonconfirming:3035
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACATGAACGGTGGCACCTA
Suggested primer 2:TAAGGGACAAGACGGGTGAC