Insertion junction: LMJ.RY0402.064021_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.064021
Chromosome:chromosome 1
Location:986887
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g005500 (1 of 2) PTHR10783//PTHR10783:SF3 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // VACUOLAR TRANSPORTER CHAPERONE 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCACAGCACACCCGCGCAGCTGCAGCC
Internal bar code:AAACGACTACGGTAACACGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:346
LEAP-Seq percent confirming:94.6758
LEAP-Seq n confirming:1796
LEAP-Seq n nonconfirming:101
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCCATTACTACCTGCGA
Suggested primer 2:GTTTACTTTGTGTGGCCGGT