Insertion junction: LMJ.RY0402.064045_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.064045
Chromosome:chromosome 7
Location:4970157
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g346750 PUS14 (1 of 2) 5.4.99.28//5.4.99.29 - tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA // 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGACGCGGACACGGCCCACGTGATCTAC
Internal bar code:GAGAGGGGGGGAGAGATGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:83.2381
LEAP-Seq n confirming:437
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTGACAGTGAAGTGGA
Suggested primer 2:CCACGTGTGTGTGTGTGTGT