Insertion junction: LMJ.RY0402.064104_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.064104
Chromosome:chromosome 8
Location:4739874
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g384200 (1 of 1) IPR000104//IPR003191//IPR009148//IPR015894//IPR027417//IPR030386 - Antifreeze protein, type I // Guanylate-binding protein, C-terminal // Streptococcal non-M secreted SibA // Guanylate-binding protein, N-terminal // P-loop containing nucleoside triphosphate hydrolase // GB1/RHD3-type guanine nucleotide-binding (G) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACCGCAGACACGAAGACGCATGCGGCA
Internal bar code:CCCGCCAATGTTATATGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:99.6523
LEAP-Seq n confirming:2293
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGGTGGTTGAAAACAGAG
Suggested primer 2:GCCGGACAAGTACATCAAGG