Insertion junction: LMJ.RY0402.064396_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.064396
Chromosome:chromosome 5
Location:246828
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACACAACTCCCAACTGACTCCTCCTGTC
Internal bar code:CAAACCGTGCGTTGGCTACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:982
LEAP-Seq percent confirming:99.4192
LEAP-Seq n confirming:2739
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTCCTCTCTGCCCTTTG
Suggested primer 2:TCGTTTCTGTTCTGCAGTGG