Insertion junction: LMJ.RY0402.064437_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.064437
Chromosome:chromosome 1
Location:5554793
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g039450 (1 of 2) PTHR34548//PTHR34548:SF2 - FAMILY NOT NAMED // PROTEIN TIC 21, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCGCCATGCCGTCCATGGAGCCCATCA
Internal bar code:ATTCAAAGTGGACAGCAATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:99.8691
LEAP-Seq n confirming:763
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACCTGTAAAGCAATGCC
Suggested primer 2:GGCTTCATGACCTTGTGGTT