Insertion junction: LMJ.RY0402.064684_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.064684
Chromosome:chromosome 4
Location:1871631
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCTCGCTCTTTTGTACTGGGTTTAATT
Internal bar code:ACCACCAATCGAGATACACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:297
LEAP-Seq percent confirming:99.2
LEAP-Seq n confirming:620
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGCAACTGAAACGAGT
Suggested primer 2:CACTCACCACTGATTCCACG