Insertion junction: LMJ.RY0402.064689_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.064689
Chromosome:chromosome 2
Location:5200394
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g105750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCGTGATTATATTAATGCCCCACGAG
Internal bar code:CGCGAGGTTTATTAGCGCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:810
LEAP-Seq percent confirming:85.3186
LEAP-Seq n confirming:308
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACTGCAAACGAAGCCCT
Suggested primer 2:TGTATGAGTAGCGGCGTGAG