Insertion junction: LMJ.RY0402.064786_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.064786
Chromosome:chromosome 12
Location:2579471
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g505250 FAP288 (1 of 3) PF13202//PF13499 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7); EF Hand Containing Flagellar Associated Protein 288 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACTGAATACTTCTTAACTGAACGACAC
Internal bar code:TGGACCCCTGGGCACGAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:256
LEAP-Seq percent confirming:83.0633
LEAP-Seq n confirming:564
LEAP-Seq n nonconfirming:115
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTTCCTCTTAGCGGCCT
Suggested primer 2:TCAGCATCTTCAATGCTTGC