Insertion junction: LMJ.RY0402.065145_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.065145
Chromosome:chromosome 10
Location:1688957
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g430150 REP27,LPA1 (1 of 1) PF11998//PF13414 - Protein of unknown function (DUF3493) (DUF3493) // TPR repeat (TPR_11); Low Photosystem II Accumulation 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCTGGAATGCGTGGCAGCGTGGGCTGC
Internal bar code:AGCGACTGAACATAATGAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:794
LEAP-Seq percent confirming:98.2387
LEAP-Seq n confirming:7028
LEAP-Seq n nonconfirming:126
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAACTGCTACATCCAGGT
Suggested primer 2:GTTTCGAATGTGGCAATGTG