Insertion junction: LMJ.RY0402.065724_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.065724
Chromosome:chromosome 1
Location:1778117
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g009575 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACAGGCGGTGGTCAAGGCTGTAGCGG
Internal bar code:TTTGGTCAAGTACGAGGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:98.3885
LEAP-Seq n confirming:3419
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTAGTGACGCAGCAAAGC
Suggested primer 2:GCCCCTAGGATAACTCTGGC