Insertion junction: LMJ.RY0402.065832_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.065832
Chromosome:chromosome 4
Location:1185925
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g215600 (1 of 1) PTHR32183:SF6 - THIOCYANATE METHYLTRANSFERASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCACCATCTCGATCGCAGCAGCGTCCGC
Internal bar code:TTGATCATTGGACAACCTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:99.5557
LEAP-Seq n confirming:9411
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGATGCCCAGTGCAGTA
Suggested primer 2:CAGCGCACTCTCATGCTTAG