Insertion junction: LMJ.RY0402.065903_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.065903
Chromosome:chromosome 6
Location:3766706
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATCCCGCGTCCGTGCGTGCAGAAACCA
Internal bar code:CCAACGGTCCACGCAGGCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:99.6829
LEAP-Seq n confirming:943
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGTCTTACCTGGTAGC
Suggested primer 2:GTGAGGGTATTCGGACCTCA