Insertion junction: LMJ.RY0402.065903_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.065903
Chromosome:chromosome 6
Location:3766846
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACCTGGCGCTGGGACATCCCTCCATTGA
Internal bar code:CTGTGACGTTCTGCCTCCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:120
LEAP-Seq percent confirming:1.95667
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1403
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTGAGCCCATTATTGAA
Suggested primer 2:CGTTCGATAGGTCGGTTGTT