Insertion junction: LMJ.RY0402.066030_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.066030
Chromosome:chromosome 3
Location:2277126
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGGAGTTCGGTCCGCTTGCCCAAAGCG
Internal bar code:TTAGCATAATTTCAATAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:99.6162
LEAP-Seq n confirming:10122
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGTAGGCTGCATGACTG
Suggested primer 2:CCGATAACCTACATGCACCC