Insertion junction: LMJ.RY0402.066312_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.066312
Chromosome:chromosome 16
Location:1135153
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650100 PETN Subunit of the chloroplast cytochrome b6f complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCATCACCATGACTACTCCAAGACAGCA
Internal bar code:ACGAGAATTTTCAGCAAGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:99.6091
LEAP-Seq n confirming:1529
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAAAAGCCTTCAGCAAG
Suggested primer 2:ATTTGCCAAGTGCAAAAACC