Insertion junction: LMJ.RY0402.066361_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.066361
Chromosome:chromosome 3
Location:3338114
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g166500 (1 of 2) IPR000104//IPR013083 - Antifreeze protein, type I // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTTGGGCGGGTAGCCTGGAGCGTGTGTG
Internal bar code:AAACTAAGACGGCCGAGCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:52.9878
LEAP-Seq n confirming:2341
LEAP-Seq n nonconfirming:2077
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTAGCTTTGCAGCCTCT
Suggested primer 2:TTCACCAACCTGCCTTAACC