Insertion junction: LMJ.RY0402.066822_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.066822
Chromosome:chromosome 8
Location:2481508
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g371801 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGAGACTGGGAAACACTTGTCCCCAAG
Internal bar code:CCTCCCACGGCGGCACCGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:404
LEAP-Seq percent confirming:88.6511
LEAP-Seq n confirming:2320
LEAP-Seq n nonconfirming:297
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCAACTCTGCCCTCGCT
Suggested primer 2:CCGGCCAACCTAACAACTAA