Insertion junction: LMJ.RY0402.067340_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.067340
Chromosome:chromosome 9
Location:3930192
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g392319 VSP6 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATCACCTACACCTACGACATCTGCCTG
Internal bar code:GACCGTGGATCATAAGTAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:99.6337
LEAP-Seq n confirming:2992
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATGGCTTACACCGTCA
Suggested primer 2:CATATGCACCATGCAGGAAC